Studying how genomes express themselves

Free Open-Source Software from the Ardell Lab

  • CMCpy: Genetic Code-Message Coevolution Models in Python.
  • TFAM: A tRNA function classifier.
  • SCANMS: Multiple-testing corrections for significance testing in sliding-window analysis of sequence polymorphism statistics.
  • Statistics::Descriptive::Weighted A Perl module (on CPAN)
    for computing descriptive statistics of weighted variates, including
    weighted mean, variance, median, percentile, and others. Has an efficient
    underlying data structure to compute the weighted ECDF, weighted quantile
    function, and other summaries. Useful for Monte Carlo estimation of